Information for 15-AGAGTACCTTCT (Motif 12)

C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T
Reverse Opposite:
C G T A C T A G C T G A G T C A T A C G A C T G A G C T G T C A A G T C A C G T A G T C A C G T
p-value:1e-55
log p-value:-1.269e+02
Information Content per bp:1.827
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.7 +/- 47.7bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGAGTACCTTCT--
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AGAGTACCTTCT
-----GCCTTCT
 C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T

Tb_0220(RRM)/Trypanosoma_brucei-RNCMPT00220-PBM/HughesRNA

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AGAGTACCTTCT-
------CTTTCTN
 C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A G C T A G T C A G C T G A C T

RBM5(Znf)/Homo_sapiens-RNCMPT00055-PBM/HughesRNA

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGAGTACCTTCT
----TTCCTTC-
 C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A G T C A G T C A G C T A C G T A G T C A C G T

Tb_0230(RRM)/Trypanosoma_brucei-RNCMPT00230-PBM/HughesRNA

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGAGTACCTTCT
----GTCCTTCT
 C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C T G G A C T A G T C A G T C A C G T A C G T A G T C A G C T

CG11360(KH)/Drosophila_melanogaster-RNCMPT00129-PBM/HughesRNA

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAGTACCTTCT
AGAGTATA----
 C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T
C G T A A C T G C G T A C T A G C G A T C G T A G C A T C T G A A C G T A C G T A C G T A C G T

AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGAGTACCTTCT----
-TAGAASCTTCTAGAA
 C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A C A T G C G T A C G T A A T C G A G T C G A C T A C G T A G T C A G C T T C G A A C T G C G T A C G T A

MOT3/Literature(Harbison)/Yeast

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGAGTACCTTCT
----TACCTN--
 C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A C G T C A G T A C G T A C G T

MOT3(MacIsaac)/Yeast

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGAGTACCTTCT
----TACCTN--
 C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A C G T C A G T A C G T A C G T

MOT3/MA0340.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGAGTACCTTCT
----TACCTN--
 C G T A C T A G C G T A T A C G A C G T C T G A T G A C A T G C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C A C G T C A G T A C G T A C G T