Information for 9-YACACGAGGG (Motif 13)

A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C A C G T A G T C A C T G A C G T A C T G A C G T C T A G
p-value:1e-51
log p-value:-1.175e+02
Information Content per bp:1.936
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets94.2 +/- 39.8bp
Average Position of motif in Background83.2 +/- 42.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNRNPL(RRM)/Homo_sapiens-RNCMPT00091-PBM/HughesRNA

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:YACACGAGGG
-ACACAAN--
 A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
A C G T C G T A A G T C C G T A G T A C T C G A T C G A T C G A A C G T A C G T

EmBP-1/MA0128.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:YACACGAGGG
-ACACGTGG-
 A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
A C G T C G T A A T G C C G T A A G T C A C T G A C G T A T C G A T C G A C G T

OJ1058_F05.8/MA1033.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:YACACGAGGG
-ACACGTGG-
 A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T

SPT/MA1061.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:YACACGAGGG
-NCACGTGGG
 A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
A C G T T C A G A T G C C T G A A G T C C T A G G A C T C T A G T A C G A T C G

ABF1(bZIP)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:YACACGAGGG
-ACACGTGGC
 A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
A C G T C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C T G G T A C

Lm_0223(RRM)/Leishmania_major-RNCMPT00223-PBM/HughesRNA

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-YACACGAGGG
TTACACG----
 A C G T A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
A C G T C G A T C G T A A G T C C G T A A G T C C T A G A C G T A C G T A C G T A C G T

PHO4(MacIsaac)/Yeast

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:YACACGAGGG
--CACGTGG-
 A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
A C G T A C G T A G T C C T G A G A T C C T A G A G C T C T A G T A C G A C G T

BZR2/MA0549.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:YACACGAGGG-
CGCACGTGTGA
 A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G A C G T
G T A C T C A G A G T C C G T A A G T C A C T G A C G T C T A G C A G T T A C G T C G A

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:YACACGAGGG
--CACGTGGN
 A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T

BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--YACACGAGGG
NNCRCACGTGCG
 A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C T G C G T A A C T G A C T G A C T G
C G A T C T A G A G T C T C A G A G T C C T G A A G T C C T A G G A C T C T A G A G T C T C A G