Information for 16-GGCAGTGT (Motif 14)

A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A C G T A C T G G T A C A G T C
p-value:1e-50
log p-value:-1.168e+02
Information Content per bp:1.941
Number of Target Sequences with motif712.0
Percentage of Target Sequences with motif3.87%
Number of Background Sequences with motif638.2
Percentage of Background Sequences with motif2.09%
Average Position of motif in Targets97.5 +/- 49.9bp
Average Position of motif in Background98.3 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGCAGTGT---
---AGTGWSMH
 A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A T C G A C G T A C T G C G T A T A C G T G C A G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GGCAGTGT----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGCAGTGT
--CTTTGT
 A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Rbm24(RRM)/Tetraodon_nigroviridis-RNCMPT00285-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGCAGTGT--
--GAGTGTGN
 A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G A T C T A G C T A G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGCAGTGT
AGAGGAAGTG-
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGCAGTGT---
---AGTGANDN
 A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A C G A C G T C T A G C G T A T C G A C T G A C G A T

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGTGT
NGGGGCGGTG-
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T
A T C G A T C G A T C G A C T G A C T G A G T C A C T G A C T G A G C T C T A G A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGCAGTGT---
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGTGT-
TGGCAGTTGN
 A C G T A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T A C G T
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Tb_0216(RRM)/Trypanosoma_brucei-RNCMPT00216-PBM/HughesRNA

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGCAGTGT-
--CATTGTN
 A C T G A C T G A G T C C G T A C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A G T C C G T A A C G T C G A T A C T G A C G T C G T A