Information for 4-AGGKGGCGCC (Motif 2)

G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C
Reverse Opposite:
C T A G C T A G A G T C A C T G T G A C G T A C G T C A A G T C A G T C C G A T
p-value:1e-2541
log p-value:-5.853e+03
Information Content per bp:1.722
Number of Target Sequences with motif2696.0
Percentage of Target Sequences with motif14.64%
Number of Background Sequences with motif211.4
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets98.6 +/- 39.9bp
Average Position of motif in Background104.8 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0531.1/Jaspar

Match Rank:1
Score:0.90
Offset:-5
Orientation:forward strand
Alignment:-----AGGKGGCGCC
CCGCTAGATGGCGCC
 A C G T A C G T A C G T A C G T A C G T G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C
A T G C G T A C T C A G T G A C G A C T C T G A C T A G C T G A A C G T A C T G C A T G G A T C C A T G G A T C G A T C

brk/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AGGKGGCGCC
--CTGGCGCC
 G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C
A C G T A C G T T A G C A G C T A C T G C T A G A G T C C T A G G A T C A G T C

brk/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AGGKGGCGCC
--CTGGCGCC
 G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C
A C G T A C G T T A G C A G C T A C T G A C T G A G T C C T A G G A T C A G T C

brk/MA0213.1/Jaspar

Match Rank:4
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AGGKGGCGCC
--CTGGCGCC
 G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C
A C G T A C G T T A G C A G C T A C T G A C T G A G T C C T A G G A T C A G T C

brk/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:AGGKGGCGCC
---CGGCGCC
 G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C
A C G T A C G T A C G T A G C T A C T G A C T G G T A C C T A G A G T C A G T C

brk/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.78
Offset:2
Orientation:forward strand
Alignment:AGGKGGCGCC
--CCGGCGCC
 G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C
A C G T A C G T T A G C A G C T A C T G A C T G G T A C C T A G A G T C A G T C

brk/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AGGKGGCGCC
---TGGCGCT
 G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A G C T

E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AGGKGGCGCC---
NNWWWTGGCGCCAWW
 A C G T A C G T G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C A C G T A C G T A C G T
C G T A C G T A G C A T C G A T C G A T C G A T T A C G A T C G G T A C C T A G T A G C A T G C G C T A G C T A G C T A

RPN4/MA0373.1/Jaspar

Match Rank:9
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AGGKGGCGCC
-GGTGGCG--
 G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C
A C G T C T A G A C T G A C G T A C T G A C T G A G T C C T A G A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGGKGGCGCC-----
TTGGGGGCGCCCCTAG
 A C G T G C T A T C A G C T A G C A G T C A T G A C T G A G T C A C T G G A T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G