Information for 20-GGAGGAAGGGCT (Motif 20)

A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A T G C A G T C A C G T A C G T G T A C A G T C A C G T A G T C A T G C
p-value:1e-34
log p-value:-8.001e+01
Information Content per bp:1.922
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets107.9 +/- 39.8bp
Average Position of motif in Background68.6 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGAGGAAGGGCT
AGAGGAAGTG--
 A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

NCU02404(RRM)/Neurospora_crassa-RNCMPT00238-PBM/HughesRNA

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGAGGAAGGGCT
GGAGGAA-----
 A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
A C T G A C T G C G T A A C T G A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PF10_0068(RRM)/Plasmodium_falciparum-RNCMPT00199-PBM/HughesRNA

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGAGGAAGGGCT
NGGAGGAA-----
 A C G T A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
C G A T A C T G A C T G C G T A A C T G A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGAGGAAGGGCT
TGGGGAAGGGCM
 A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

SRSF1(RRM)/Homo_sapiens-RNCMPT00107-PBM/HughesRNA

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGAGGAAGGGCT
GGAGGAN-----
 A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
A C T G C T A G C G T A A C T G A C T G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00109-PBM/HughesRNA

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAGGAAGGGCT
GGAGGAN-----
 A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
A C T G A C T G C G T A A T C G A C T G C T G A T C G A A C G T A C G T A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00106-PBM/HughesRNA

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAGGAAGGGCT
GGAGGAN-----
 A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
A C T G C T A G C G T A A C T G A C T G C T G A T G A C A C G T A C G T A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00108-PBM/HughesRNA

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAGGAAGGGCT
GGAGGAN-----
 A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
A C T G A C T G C G T A A T C G A C T G C T G A T C A G A C G T A C G T A C G T A C G T A C G T

SF2(RRM)/Drosophila_melanogaster-RNCMPT00066-PBM/HughesRNA

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAGGAAGGGCT
NGGAGGA------
 A C G T A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
C T G A A C T G C T A G G C T A A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

GCR2/MA0305.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGAGGAAGGGCT
--NGGAAGC---
 A T C G A C T G C G T A A C T G A C T G C G T A C G T A A C T G A T C G A C T G A G T C A C G T
A C G T A C G T C G T A A T C G C T A G C G T A G C T A A C T G A G T C A C G T A C G T A C G T