Information for 16-GAGTCGTCAT (Motif 22)

A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G C G T A A G T C C T A G C G T A G T A C A C G T A G T C
p-value:1e-29
log p-value:-6.696e+01
Information Content per bp:1.878
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets91.7 +/- 54.4bp
Average Position of motif in Background111.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR1(KH)/Homo_sapiens-RNCMPT00161-PBM/HughesRNA

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GAGTCGTCAT-
---TTGTCATT
 A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A G C T A C T G A G C T A G T C C T G A A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCGTCAT--
NTTATTCGTCATNC
 A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T A C G T A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GAGTCGTCAT-
-----GTCATN
 A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAGTCGTCAT---
---ACGTCAYCHH
 A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C C T A G A C G T G T A C C T G A A G C T G A T C G C T A G A C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GAGTCGTCAT
-ARNTGACA-
 A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GAGTCGTCAT
--GACGTCAT
 A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T
A C G T A C G T A C T G C T G A A G T C C T A G A C G T G T A C C G T A A G C T

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GAGTCGTCAT-
---ACGTCATC
 A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T A C G T
A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C

unc-62/MA0918.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAGTCGTCAT--
GAGCTGTCATTT
 A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T A C G T A C G T
A C T G C G T A T A C G G T A C A C G T A C T G A C G T G T A C C G T A A G C T A C G T A C G T

RBM45(RRM)/Homo_sapiens-RNCMPT00241-PBM/HughesRNA

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAGTCGTCAT
-TGTCGTC--
 A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T
A C G T A C G T A C T G A G C T G T A C A T C G A C G T A G T C A C G T A C G T

DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGTCGTCAT
--GCCGACAT
 A C T G C G T A A C T G A C G T A G T C A C T G C G A T A G T C C G T A C G A T
A C G T A C G T C T A G A G T C A G T C A C T G C G T A A G T C C T G A G A C T