Information for 23-CTGTAATG (Motif 25)

A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G
Reverse Opposite:
G T A C C G T A A C G T A C G T C G T A T G A C C G T A A C T G
p-value:1e-19
log p-value:-4.492e+01
Information Content per bp:1.941
Number of Target Sequences with motif707.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif817.2
Percentage of Background Sequences with motif2.68%
Average Position of motif in Targets97.2 +/- 56.1bp
Average Position of motif in Background100.2 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTGTAATG
CACTAATT
 A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

PUM(PUF)/Drosophila_melanogaster-RNCMPT00105-PBM/HughesRNA

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CTGTAATG
-TGTAATT
 A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G
A C G T A C G T A C T G A C G T C G T A G C T A C G A T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CTGTAATG-
-GKTAATGR
 A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C G T
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------CTGTAATG---
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

ems/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CTGTAATG--
CTTTAATGAG
 A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A G T C C G A T G A C T C G A T C G T A C T G A A C G T A C T G C T G A T C A G

ap/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CTGTAATG-
---TAATNN
 A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T

Ubx/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CTGTAATG-
---TAATTG
 A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T C G A T C G T A C G T A C G A T C A G T C A T G

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CTGTAATG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CTGTAATG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

ftz/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTGTAATG-
-TTTAATTG
 A G T C A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A G C T A C G T C G T A C G T A C A G T C A G T C A T G