Information for 19-GTRTMCCGCG (Motif 26)

A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C T G C A T G A C G T C G T A A G T C C G T A A G T C
p-value:1e-19
log p-value:-4.489e+01
Information Content per bp:1.862
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.6 +/- 57.5bp
Average Position of motif in Background100.4 +/- 72.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.69
Offset:6
Orientation:forward strand
Alignment:GTRTMCCGCG---
------CGCGCGG
 A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C A C T G A G T C T A C G T A C G

UGA3/MA0410.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GTRTMCCGCG-
---TCCCGCCG
 A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G A C G T
A C G T A C G T A C G T C G A T A T G C A G T C A G T C A C T G A G T C A T G C T A C G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTRTMCCGCG
DTTTCCCGCC
 A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

RBM4(RRM,Znf)/Homo_sapiens-RNCMPT00052-PBM/HughesRNA

Match Rank:4
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GTRTMCCGCG-
----CCCGCGC
 A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T T A G C T A G C A T G C A T C G A G T C A C T G A G T C

RBM4(RRM,Znf)/Homo_sapiens-RNCMPT00113-PBM/HughesRNA

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GTRTMCCGCG-
----CCCGCGC
 A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A G T C T A G C A T G C A T C G A G T C A T C G T A G C

MBP1/MA0329.1/Jaspar

Match Rank:6
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GTRTMCCGCG--
-----ACGCGTA
 A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C T A G A G T C A T C G G C A T G T C A

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTRTMCCGCG-
---TTTCGCGT
 A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G A C G T
A C G T A C G T A C G T G A C T A C G T C G A T A T G C A T C G A G T C A T C G A G C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTRTMCCGCG
NYTTCCCGCC
 A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTRTMCCGCG-
VDTTTCCCGCCA
 A C G T A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

LARK(RRM,Znf)/Drosophila_melanogaster-RNCMPT00124-PBM/HughesRNA

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GTRTMCCGCG---
-----CCGCGCGN
 A C T G A C G T T C A G A C G T G T C A G A T C A G T C A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C A T G C A T C G A G T C A T C G G T A C A T C G C T A G