Information for 22-GTCCGGAGCA (Motif 28)

A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C T G C G T A A G T C
p-value:1e-16
log p-value:-3.690e+01
Information Content per bp:1.972
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets112.7 +/- 58.1bp
Average Position of motif in Background139.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ECM22/MA0292.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GTCCGGAGCA
-TCCGGAN--
 A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
A C G T A G C T G T A C A T G C A C T G A C T G C G T A C A T G A C G T A C G T

SIP4/MA0380.1/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GTCCGGAGCA
-TCCGGAG--
 A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
A C G T A G C T G A T C A G T C A C T G C T A G C T G A T C A G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:GTCCGGAGCA
---CGGAGC-
 A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

YER184C/MA0424.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GTCCGGAGCA
TTCCGGAN--
 A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
A G C T A C G T A G T C A G T C A C T G T A C G T C G A C A T G A C G T A C G T

CAT8/MA0280.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GTCCGGAGCA
--CCGGAA--
 A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
A C G T A C G T A G T C A G T C A C T G A C T G T C G A C T G A A C G T A C G T

RGT1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GTCCGGAGCA
---CGGANNA
 A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C G T A C G T C G T A

GSM1/MA0308.1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GTCCGGAGCA-------
NNNACTCCGGAGTTTNNTNAN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G T C A G C A T T G C A A G T C A G C T G A T C T A G C A T C G C T A G T C G A T C A G G C A T G C A T C G A T G A C T G A C T G C A T C T G A T G C A C G A T

YLR278C/MA0430.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTCCGGAGCA
--CCGGAGTT
 A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
A C G T A C G T A G T C A G T C A C T G A C T G C T G A T A C G C G A T C G A T

SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GTCCGGAGCA
NNWHTGTACGGAHNH
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
C G T A G C T A C G T A G C A T A G C T A C T G A C G T C G T A A G T C A C T G A C T G G C T A G T C A C T G A G C T A

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTCCGGAGCA
---NGGAGAA
 A C T G A C G T A G T C A G T C A C T G A C T G C G T A A C T G A G T C C T G A
A C G T A C G T A C G T G T A C A C T G A C T G C G T A A C T G C G T A C T G A