Information for 23-CGCCCAAATT (Motif 29)

G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A G C T C T A G C T A G A C T G A G T C A C T G
p-value:1e-14
log p-value:-3.265e+01
Information Content per bp:1.865
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets83.2 +/- 57.6bp
Average Position of motif in Background103.0 +/- 65.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNRNPR(RRM)/Gallus_gallus-RNCMPT00288-PBM/HughesRNA

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CGCCCAAATT
---CCAAATT
 G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T G T A C G T A C C G T A C G T A C G T A C G A T A G C T

CG17838(RRM)/Drosophila_melanogaster-RNCMPT00131-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CGCCCAAATT-
----GAAATTT
 G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G A T A C G T C A G T

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CGCCCAAATT
AAGCATACGCCCAACTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

DAL82/MA0291.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGCCCAAATT
-GCGCACATT
 G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T
A C G T A C T G A G T C A C T G A G T C C T G A G A T C C G T A C G A T A C G T

PCF/Arabidopsis-Promoters/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCAAATT-
NHHARGCCCAWWWNN
 A C G T A C G T A C G T A C G T G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T A C G T
G C T A G C T A G C A T G C T A C T A G A C T G A G T C A G T C A G T C C G T A G C A T G C A T C G T A C G T A C G T A

DAL82(MacIsaac)/Yeast

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGCCCAAATT-
-GCGCAANTTT
 G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T A C G T
A C G T C T A G A G T C C T A G A G T C C T G A G C T A A G T C G C A T C G A T G A C T

DREB1E/MA0978.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGCCCAAATT
-GCCGACAT-
 G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T
A C G T C T A G G A T C G T A C C T A G C G T A G A T C C T G A G A C T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGCCCAAATT
--CACTAATT
 G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T
A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGCCCAAATT---
---GCTAATTAGC
 G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCAAATT
YCCGCCCACGCN
 A C G T A C G T G T A C A C T G T A G C G A T C A G T C C T G A G T C A C G T A A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A