Information for 5-TGCTGCCATCTA (Motif 3)

A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A
Reverse Opposite:
A C G T C G T A A T C G C T G A A C G T C A T G A C T G G T A C C G T A T A C G G A T C T G C A
p-value:1e-1285
log p-value:-2.960e+03
Information Content per bp:1.878
Number of Target Sequences with motif1223.0
Percentage of Target Sequences with motif6.64%
Number of Background Sequences with motif71.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets101.2 +/- 42.2bp
Average Position of motif in Background96.6 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCATCTA-
-GCCGCCATCTTG
 A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A A C G T
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCATCTA-
-GCNGCCATCTTG
 A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A A C G T
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Unknown3/Drosophila-Promoters/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCCATCTA--
GCGCTGCCAGMTBGT
 A C G T A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A A C G T A C G T
C T A G T A G C A C T G G A T C A C G T A C T G A G T C A G T C C G T A T A C G G T A C A G C T A G C T C A T G A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCCATCTA-------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCTGCCATCTA
TGATGCAATC--
 A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A
A C G T T A C G C G T A A G C T A C T G G T A C C G T A G T C A A G C T G A T C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCTGCCATCTA
--ATGCCAACC-
 A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGCTGCCATCTA--
----GCCATCTGTT
 A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGCTGCCATCTA
---TGTCANYT-
 A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCTGCCATCTA-------
TAGCGCCCCCTGGTGGCCA
 A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCTGCCATCTA
--CTGCCCGCA-
 A C G T C T A G A G T C A C G T A C T G G T A C G A T C G T C A A G C T A T G C C G A T T G C A
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T