Information for 14-GAACAGCG (Motif 9)

A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C T G A C G T C G A T T G A C
p-value:1e-60
log p-value:-1.403e+02
Information Content per bp:1.914
Number of Target Sequences with motif1167.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif1156.2
Percentage of Background Sequences with motif3.79%
Average Position of motif in Targets97.8 +/- 53.4bp
Average Position of motif in Background98.6 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAGCG----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAGCG----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

Ot_0263(RRM)/Ostreococcus_tauri-RNCMPT00263-PBM/HughesRNA

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GAACAGCG
AGAACAA--
 A C G T A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G
C G T A A C T G C G T A C G T A A G T C C T G A C T G A A C G T A C G T

YBX2(CSD)/Homo_sapiens-RNCMPT00084-PBM/HughesRNA

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GAACAGCG
-AACAACN
 A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G
A C G T C T G A C T G A A T G C C G T A C G T A A G T C C G T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAGCG----
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

ZC3H10(Znf)/Homo_sapiens-RNCMPT00085-PBM/HughesRNA

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GAACAGCG-
--GCAGCGC
 A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G A C G T
A C G T A C G T A T C G T A G C G T C A A C T G A G T C A C T G G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GAACAGCG
CCAGGAACAG--
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAACAGCG
TGGAACAGMA
 A C G T A C G T A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAACAGCG
-CACAGN-
 A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

lin-14/MA0261.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAACAGCG
GAACAC--
 A C T G C G T A C G T A G T A C G T C A A C T G A G T C C T A G
A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T