Information for 18-TCATTGGCTGAG (Motif 17)

A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G
Reverse Opposite:
A G T C A G C T G A T C C T G A T A C G A G T C A G T C G C T A G T C A G A C T C T A G G T C A
p-value:1e-52
log p-value:-1.204e+02
Information Content per bp:1.960
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.8 +/- 64.3bp
Average Position of motif in Background112.3 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TCATTGGCTGAG
TGATTGGCTANN
 A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

HAP3/MA0314.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TCATTGGCTGAG-
TCTGATTGGTTCAGA
 A C G T A C G T A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G A C G T
A C G T G T A C A G C T A T C G C G T A A C G T A C G T A C T G A C T G A G C T A G C T T A G C C T G A C T A G G C T A

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGGCTGAG
CCGATTGGCT---
 A C G T A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

HAP2(MacIsaac)/Yeast

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGGCTGAG
CTCATTGG-----
 A C G T A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G
A G T C G A C T T A G C T C G A A C G T G A C T A C T G C T A G A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCATTGGCTGAG--
CTGATTGGTCNATTT
 A C G T A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

HAP2/Literature(Harbison)/Yeast

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCATTGGCTGAG
--ATTGG-----
 A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G
A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

HAP3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCATTGGCTGAG
--ATTGG-----
 A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G
A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

HAP5/Literature(Harbison)/Yeast

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCATTGGCTGAG
--ATTGG-----
 A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G
A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

HAP5(MacIsaac)/Yeast

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCATTGGCTGAG
--ATTGG-----
 A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G
A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

HAP3(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCATTGGCTGAG
--ATTGG-----
 A C G T A G T C C T G A A C G T C A G T A C T G T C A G A G T C A G C T C T A G T C G A T C A G
A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T