Information for 5-TAGRTGGCAGCA (Motif 2)

G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A
Reverse Opposite:
A C G T C T A G A T G C A G C T A C T G G T A C A G T C T G C A A G T C A G T C A C G T C T G A
p-value:1e-1363
log p-value:-3.140e+03
Information Content per bp:1.741
Number of Target Sequences with motif1411.0
Percentage of Target Sequences with motif5.53%
Number of Background Sequences with motif58.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets96.1 +/- 43.7bp
Average Position of motif in Background117.3 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------TAGRTGGCAGCA-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------TAGRTGGCAGCA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAGRTGGCAGCA
CAAGATGGCGGC-
 A C G T G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TAGRTGGCAGCA---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Unknown3/Drosophila-Promoters/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAGRTGGCAGCA-
ACVAKCTGGCAGCGC
 A C G T A C G T G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A A C G T
T C G A G T A C T C G A T C G A C A T G A T G C A C G T A C T G A C T G A G T C C G T A C T A G A G T C A T C G A G T C

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAGRTGGCAGCA
CAAGATGGCGGC-
 A C G T G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

CTCF/MA0531.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TAGRTGGCAGCA
CCGCTAGATGGCGCC-
 A C G T A C G T A C G T A C G T G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A
A T G C G T A C T C A G T G A C G A C T C T G A C T A G C T G A A C G T A C T G C A T G G A T C C A T G G A T C G A T C A C G T

SUM1(MacIsaac)/Yeast

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGRTGGCAGCA---
-ANGCGTCAGTAAAT
 G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A A C G T A C G T A C G T
A C G T T G C A C T G A C T A G G A T C C T A G G C A T A G T C T C G A A T C G G C A T T C G A C G T A G C T A C A G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAGRTGGCAGCA---
ADGGYAGYAGCATCT
 G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TAGRTGGCAGCA----
-----GTCAGCANNTN
 G A C T C G T A C T A G C T A G A C G T C T A G A C T G G T A C C T G A A T C G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T