Information for 16-GGCAAGAGCG (Motif 22)

A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G
Reverse Opposite:
A G T C C T A G A T G C A C G T G T A C A C G T A C G T A C T G G T A C A G T C
p-value:1e-33
log p-value:-7.692e+01
Information Content per bp:1.926
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets102.9 +/- 49.8bp
Average Position of motif in Background105.3 +/- 53.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGCAAGAGCG
AAGGCAAGTGT-
 A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

HAP1/HAP1_YPD/[](Harbison)/Yeast

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCAAGAGCG-
GGAAATATCGG
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G A C G T
A T C G T A C G T G C A T C G A G C T A A G C T G C T A G A C T G T A C T C A G A T C G

Sf3b4(RRM)/Danio_rerio-RNCMPT00224-PBM/HughesRNA

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCAAGAGCG
-NCAAAAG--
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G
A C G T C A G T A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T

RIM101/MA0368.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCAAGAGCG
CGCCAAG----
 A C G T A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G
A G T C A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCAAGAGCG
--RGAGAGAG
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G
A C G T A C G T C T A G T C A G C T G A T C A G T G C A A C T G T C G A T C A G

MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCAAGAGCG---
---AGGAGCGTND
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G A C T G G T C A A C T G A G T C A T C G A C G T A C T G C G A T

Tb_0217(RRM)/Trypanosoma_brucei-RNCMPT00217-PBM/HughesRNA

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCAAGAGCG
-ACAACAG--
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G
A C G T C T G A T G A C G T C A G T C A T G A C G T C A C T A G A C G T A C G T

MBNL1(Znf)/Homo_sapiens-RNCMPT00038-PBM/HughesRNA

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCAAGAGCG
-GCAAGCN--
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G
A C G T A T C G A G T C C G T A C G T A C T A G A T G C G C A T A C G T A C G T

z/dmmpmm(Down)/fly

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGCAAGAGCG
----TGAGTG
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G
A C G T A C G T A C G T A C G T G C A T A C T G C G T A T C A G G A C T A T C G

MATR3(RRM)/Homo_sapiens-RNCMPT00037-PBM/HughesRNA

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGCAAGAGCG
--CAAGATT-
 A C T G A C T G A G T C C G T A C G T A A C T G C G T A A T C G A G T C A C T G
A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G A T A C G T A C G T