Information for 17-CTAGTGCG (Motif 23)

G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G G T A C C G T A A G T C A C G T C G T A A C T G
p-value:1e-30
log p-value:-7.111e+01
Information Content per bp:1.921
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets101.0 +/- 50.2bp
Average Position of motif in Background102.6 +/- 66.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSI1(RRM)/Homo_sapiens-RNCMPT00176-PBM/HughesRNA

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTAGTGCG
-TAGTTAG
 G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G
A C G T A C G T C G T A A C T G C A G T C G A T C T G A A C T G

DAL82/MA0291.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTAGTGCG-
AATGTGCGC
 G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T
C G T A G C T A C G A T C T A G A G C T A C T G A G T C A C T G A G T C

MSI1(RRM)/Homo_sapiens-RNCMPT00041-PBM/HughesRNA

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTAGTGCG
-TAGTTAG
 G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G
A C G T A C G T C G T A A C T G C G A T C G A T C T G A C T A G

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTAGTGCG-
-TAGCGCGC
 G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T
A C G T C G A T C T G A C T A G G T A C A C T G A G T C C T A G A G T C

AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTAGTGCG--
--AGTGWSMH
 G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T C G T A A T C G A C G T A C T G C G T A T A C G T G C A G A C T

PFF0320c(RRM)/Plasmodium_falciparum-RNCMPT00235-PBM/HughesRNA

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTAGTGCG
GTTTAGT---
 A C G T A C G T G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G
C A T G G C A T A G C T A C G T C G T A A C T G A G C T A C G T A C G T A C G T

STP3/MA0396.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTAGTGCG
GCTAGCGCA
 A C G T G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G
C T A G A T G C A C G T C G T A A C T G A G T C A C T G A G T C C G T A

Rbm42(RRM)/Xenopus_tropicalis-RNCMPT00282-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTGCG
NGTAGTTG-
 A C G T G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G
G A T C A C T G A C G T C G T A A C T G A C G T C G A T A T C G A C G T

STP4/MA0397.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTAGTGCG
GATAGCGCA
 A C G T G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G
C T A G T G C A A C G T C G T A A C T G A G T C A C T G A T G C C T G A

RBM42(RRM)/Homo_sapiens-RNCMPT00151-PBM/HughesRNA

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTGCG
CTTAGTT--
 A C G T G T A C A C G T C G T A A C T G A C G T A C T G A G T C A C T G
A G T C C A G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T