Information for 21-AGCCCAACAG (Motif 26)

C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G A C G T A C G T A C T G A C T G A C T G G T A C A C G T
p-value:1e-25
log p-value:-5.949e+01
Information Content per bp:1.930
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets106.4 +/- 50.5bp
Average Position of motif in Background111.8 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PCF/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----AGCCCAACAG-
NHHARGCCCAWWWNN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G A C G T
G C T A G C T A G C A T G C T A C T A G A C T G A G T C A G T C A G T C C G T A G C A T G C A T C G T A C G T A C G T A

UNC-75(RRM)/Caenorhabditis_elegans-RNCMPT00081-PBM/HughesRNA

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGCCCAACAG
--CACAACA-
 C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G
A C G T A C G T G A T C G T C A G T A C G C T A C G T A G A T C G T C A A C G T

Tb_0217(RRM)/Trypanosoma_brucei-RNCMPT00217-PBM/HughesRNA

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGCCCAACAG
---ACAACAG
 C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G
A C G T A C G T A C G T C T G A T G A C G T C A G T C A T G A C G T C A C T A G

RAV1(1)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCCCAACAG---
-CAGCAACAGAAA
 C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G A C G T A C G T A C G T
A C G T T G A C G C T A T A C G A G T C T G C A T G C A A G T C C G T A C A T G C G T A C G T A C T G A

RAV1/MA0582.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCCCAACAG---
-CAGCAACAGAAA
 C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G A C G T A C G T A C G T
A C G T T G A C G C T A T A C G A G T C T G C A T G C A A G T C C G T A C A T G C G T A C G T A C T G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCCCAACAG----
AACACCAAAACAAAGGA
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Sf3b4(RRM)/Danio_rerio-RNCMPT00224-PBM/HughesRNA

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGCCCAACAG
---NCAAAAG
 C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G
A C G T A C G T A C G T C A G T A G T C C G T A C G T A C G T A C G T A A C T G

RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AGCCCAACAG------
----CAACAGAAAWWA
 C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T G C A C T G A T G A C T C G A C A T G C G T A C T G A C G T A G C A T G C A T G T C A

BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCCCAACAG
NNRCCTAACT-
 A C G T C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G
A G T C C A G T T C A G A T G C A G T C C G A T C G T A G T C A G A T C G C A T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCCCAACAG-----
CGACCAACTGCCGTG
 C G T A A C T G A G T C A G T C A G T C C G T A C G T A G A T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G