Information for 23-GACATCAATA (Motif 27)

A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A
Reverse Opposite:
A C G T C G T A A G C T A C G T A C T G C G T A A C G T A C T G A C G T A G T C
p-value:1e-23
log p-value:-5.463e+01
Information Content per bp:1.930
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif19.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets108.3 +/- 51.4bp
Average Position of motif in Background89.3 +/- 49.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GACATCAATA----
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

BZIP60/MA0967.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GACATCAATA
TGACGTCA---
 A C G T A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A
A G C T A C T G C G T A A G T C C T A G G C A T T G A C T C G A A C G T A C G T A C G T

TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GACATCAATA
GACGTCAB--
 A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A
A C T G C G T A A G T C C T A G G C A T T G A C C G T A A G T C A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACATCAATA-
ATGACATCATCNN
 A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

YBX1(CSD)/Homo_sapiens-RNCMPT00116-PBM/HughesRNA

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GACATCAATA
AACATCA---
 A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A
C G T A G T C A A G T C C G T A A G C T A G T C C T G A A C G T A C G T A C G T

Unknown2/Drosophila-Promoters/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GACATCAATA
--CATCMCTA
 A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A
A C G T A C G T A G T C C G T A C G A T A G T C G T C A A G T C A C G T C T G A

DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GACATCAATA
YGYCGACATC----
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A
G A C T T C A G A G T C A G T C T A C G C T G A A G T C C G T A G A C T A T G C A C G T A C G T A C G T A C G T

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GACATCAATA
GAAATCAA--
 A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A
C T A G C T G A C T G A C G T A G A C T A T G C T G C A C T G A A C G T A C G T

SPT23(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GACATCAATA
GAAATCAA--
 A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A
C T A G C T G A C T G A C G T A G A C T A T G C T G C A C T G A A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GACATCAATA
HNRAATCAAT-
 A C G T A C T G C G T A A G T C C G T A A C G T A G T C C G T A C T G A C G A T C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T