Information for 5-CCVCTAVG (Motif 4)

G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
Reverse Opposite:
T G A C A G T C C G A T G T C A C T A G A C G T A T C G C A T G
p-value:1e-539
log p-value:-1.242e+03
Information Content per bp:1.464
Number of Target Sequences with motif2426.0
Percentage of Target Sequences with motif9.50%
Number of Background Sequences with motif719.5
Percentage of Background Sequences with motif2.93%
Average Position of motif in Targets100.4 +/- 52.4bp
Average Position of motif in Background107.6 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RPH1/MA0372.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCVCTAVG
ACCCCTAA-
 A C G T G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
C G T A A G T C A G T C A G T C A G T C A C G T C G T A C G T A A C G T

RDS2/MA0362.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCVCTAVG
CCCCGAN-
 G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
A G T C A G T C A G T C A G T C A C T G C G T A A C T G A C G T

HNRNPA1L2(RRM)/Homo_sapiens-RNCMPT00023-PBM/HughesRNA

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCVCTAVG
TCCCTAA-
 G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
C G A T G T A C A G T C A G T C A C G T C G T A G T C A A C G T

HNRNPA1(RRM)/Homo_sapiens-RNCMPT00022-PBM/HughesRNA

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCVCTAVG
TCCCTAN-
 G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
C G A T G T A C A G T C A G T C A C G T C G T A G T C A A C G T

Deaf1/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCVCTAVG
-CACGAA-
 G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
A C G T T A G C G T A C A G T C A C T G C G T A C T G A A C G T

Deaf1/MA0185.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCVCTAVG
-CACGAA-
 G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
A C G T T A G C G T A C A G T C A C T G C G T A C T G A A C G T

GIS1/MA0306.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCVCTAVG
ACCCCTAAA
 A C G T G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
G C T A A G T C A G T C A G T C A G T C A C G T C G T A C G T A G C T A

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00096-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCVCTAVG
-CCCTACC
 G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
A C G T A G T C A G T C A G T C C G A T C G T A G T A C A G T C

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCVCTAVG----
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00094-PBM/HughesRNA

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCVCTAVG
-CCCTACC
 G T A C T A G C T G C A G A T C C A G T C G T A T C A G A C T G
A C G T G T A C A G T C A G T C C G A T C G T A G T A C A G T C