Information for 9-GYGACAYCTAGT (Motif 8)

A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T
Reverse Opposite:
C G T A A T G C C G A T C G T A C T A G T C G A C G A T A C T G C G A T A G T C C T A G A T G C
p-value:1e-160
log p-value:-3.703e+02
Information Content per bp:1.792
Number of Target Sequences with motif152.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets107.4 +/- 43.5bp
Average Position of motif in Background178.7 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0531.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GYGACAYCTAGT--
GGCGCCATCTAGCGG
 A C G T A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T A C G T A C G T
C T A G C T A G G T A C C T A G G T A C A G T C T G C A G A C T A G T C G A C T C T G A A C T G A G T C C A T G T A C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GYGACAYCTAGT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GYGACAYCTAGT
-TGACACCT---
 A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GYGACAYCTAGT-
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GYGACAYCTAGT-
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GYGACAYCTAGT-----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CUP9/MA0288.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GYGACAYCTAGT
-TGACACATT--
 A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T
A C G T G A C T A C T G C T G A G T A C C T G A A G T C G T C A C G A T G C A T A C G T A C G T

usp/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GYGACAYCTAGT
CGTGACCCC----
 A C G T A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T
A T G C C T A G A G C T T A C G C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T

usp/MA0016.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GYGACAYCTAGT
CCGTGACCCC----
 A C G T A C G T A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T
A T G C A T G C C A T G A G C T T A C G C G T A A G T C A G T C G A T C A T G C A C G T A C G T A C G T A C G T

unc-62/MA0918.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GYGACAYCTAGT
NNNTGACAGCTN--
 A C G T A C G T A T C G G A T C T A C G C G T A A G T C G C T A A G C T A G T C G C A T G C T A A T C G A C G T
C G T A C G T A T C G A C G A T A C T G C G T A A G T C C G T A C A T G A T G C A C G T A G T C A C G T A C G T