Information for 13-TGGACCCAAGAA (Motif 12)

A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
Reverse Opposite:
C G A T A C G T A G T C A C G T A C G T A C T G A C T G A C T G A C G T A G T C A G T C C G T A
p-value:1e-2
log p-value:-4.937e+00
Information Content per bp:1.980
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif56.4
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets1283.2 +/- 772.4bp
Average Position of motif in Background20468.0 +/- 21653.1bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCP16/MA0587.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGGACCCAAGAA
GTGGACCCGG---
 A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
C T A G G A C T A C T G A C T G C T G A A T G C A G T C A G T C T C A G T A C G A C G T A C G T A C G T

OJ1581_H09.2/MA1031.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGACCCAAGAA
GTGGGCCCAC---
 A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
C A T G A C G T A C T G A C T G C T A G G A T C A G T C G T A C T G C A G T A C A C G T A C G T A C G T

NRG1(MacIsaac)/Yeast

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGGACCCAAGAA
-GGACCCT----
 A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
A C G T T C A G C T A G C G T A G A T C A G T C A G T C A G C T A C G T A C G T A C G T A C G T

TCP2/MA1064.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGACCCAAGAA
GTGGGCCCAC---
 A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
C T A G A G C T C A T G A C T G A C T G T G A C G T A C G T A C T C G A G A T C A C G T A C G T A C G T

ARALYDRAFT_897773/MA1054.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGACCCAAGAA
GTGGTCCCCA---
 A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
C T A G G A C T A T C G A T C G C A G T A T G C G T A C G T A C T G A C T C G A A C G T A C G T A C G T

TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGACCCAAGAA
-GGDCCCAC---
 A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
A C G T A C T G A C T G C A T G G A T C A G T C A G T C C T G A A G T C A C G T A C G T A C G T

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGACCCAAGAA
-GGACCCT----
 A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
A C G T T C A G T A C G C G T A A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T

At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGACCCAAGAA
-GGDCCCAC---
 A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
A C G T A C T G A C T G C T A G G A T C A G T C A G T C C T G A A G T C A C G T A C G T A C G T

TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGGACCCAAGAA
GTGGTCCCCA---
 A C G T A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
T C A G A G C T A C T G A C T G C A G T A G T C A G T C A G T C G T A C C T G A A C G T A C G T A C G T

At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGACCCAAGAA
-GGRCCCAC---
 A C G T A C T G A C T G C G T A A G T C A G T C A G T C C G T A C G T A A C T G C G T A C G T A
A C G T A C T G A C T G C T A G G A T C A G T C A G T C C T G A A G T C A C G T A C G T A C G T