Information for 16-GGTVTTCTBATA (Motif 15)

T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A
Reverse Opposite:
G C A T G T C A G C A T T G C A T C G A C A T G G C T A T C G A A C T G C G T A A G T C A G T C
p-value:1e0
log p-value:-6.752e-02
Information Content per bp:1.561
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif93.1
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets850.1 +/- 645.3bp
Average Position of motif in Background27393.0 +/- 21908.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PABPN1(RRM)/Homo_sapiens-RNCMPT00157-PBM/HughesRNA

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGTVTTCTBATA
-NTCTTCT----
 T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A
A C G T T C A G A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Su(H)/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGTVTTCTBATA
----CTCCCAC-
 T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A
A C G T A C G T A C G T A C G T A G C T A C G T A G T C A G C T A G T C C G T A A G C T A C G T

PEND/MA0127.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGTVTTCTBATA
--ACTTCTTATT
 T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A
A C G T A C G T C T G A A G T C C A G T C A G T G A T C A C G T C G A T T G C A G C A T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGTVTTCTBATA
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGTVTTCTBATA
-ATATTCTY---
 T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A
A C G T C G T A G A C T C G T A A C G T C A G T A G T C A G C T G A C T A C G T A C G T A C G T

Ot_0263(RRM)/Ostreococcus_tauri-RNCMPT00263-PBM/HughesRNA

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGTVTTCTBATA
-TTGTTCT----
 T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A
A C G T G A C T A G C T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGTVTTCTBATA
-GCCTTCT----
 T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A
A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T

KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGTVTTCTBATA
NWWTATTCYT---
 A C G T T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A
C T A G C G T A C G T A A C G T C G T A A C G T A C G T A G T C A G C T C G A T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTVTTCTBATA--
NNNTGTTGTTGTTNG
 A C G T T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

Ik-1

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTVTTCTBATA-
GGTATTCCCAANN
 T A C G T C A G G C A T T G A C A G C T C G A T G T A C A G C T A C G T C G T A C A G T C G T A A C G T
C T A G C T A G G A C T C T G A C G A T A C G T A G T C A G T C A G T C C T G A G T C A C T A G A G C T