Information for 2-CCGGATACTGGC (Motif 2)

A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C T G A C G T C G T A A C G T A G T C A G T C A C T G A C T G
p-value:1e-12
log p-value:-2.817e+01
Information Content per bp:1.530
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets151.7 +/- 278.2bp
Average Position of motif in Background27387.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ASG1/MA0275.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCGGATACTGGC
CCGGAA------
 A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
A G T C A G T C A C T G A C T G T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TUT1(RRM,Znf)/Homo_sapiens-RNCMPT00075-PBM/HughesRNA

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGGATACTGGC
--CGATACT---
 A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
A C G T A C G T G T A C C T A G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T

CAT8/MA0280.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGGATACTGGC
CCGGAA------
 A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
A G T C A G T C A C T G A C T G T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CCGGATACTGGC
AANNATCCGGATGTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C A C G T A C G T

ECM22/MA0292.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGGATACTGGC
CTCCGGA-------
 A C G T A C G T A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
G A T C C G A T A G T C A G T C A T C G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGGATACTGGC
RCCGGAARYN---
 A C G T A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCGGATACTGGC
ACCCGGATGTA---
 A C G T A C G T A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T A C G T

YER184C/MA0424.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCGGATACTGGC
TTCCGGAN------
 A C G T A C G T A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
A G C T A C G T A G T C A G T C A C T G T A C G T C G A C A T G A C G T A C G T A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGGATACTGGC
ACCGGAAGTG---
 A C G T A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGGATACTGGC
DCCGGAARYN---
 A C G T A G T C A G T C A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C T G A C T G A G T C
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T