Information for 6-CCTGGAGA (Motif 21)

A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C T G
p-value:1e0
log p-value:-0.000e+00
Information Content per bp:1.956
Number of Target Sequences with motif1087.0
Percentage of Target Sequences with motif15.11%
Number of Background Sequences with motif12853.1
Percentage of Background Sequences with motif72.49%
Average Position of motif in Targets1353.2 +/- 2043.0bp
Average Position of motif in Background22225.9 +/- 20450.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGAGA---
ACCTKGAGAAHA
 A C G T A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A A C G T A C G T A C G T
T C G A T G A C A G T C A G C T C A T G A T C G C G T A A C T G G C T A C G T A G T C A C T G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGAGA----
TTTCCTGGAAAGNNN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A A C G T A C G T A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCTGGAGA---
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A A C G T A C G T A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

XBP1(MacIsaac)/Yeast

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGAGA
TCCTCGAG-
 A C G T A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A
A C G T A T G C A G T C G A C T A G T C C A T G C T G A T C A G A C G T

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCTGGAGA-
--NGGAGAA
 A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A A C G T
A C G T A C G T G T A C A C T G A C T G C G T A A C T G C G T A C T G A

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCTGGAGA-
--TGGAAAA
 A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A A C G T
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGAGA
CACCTGANMA
 A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A
G A T C C G T A A G T C A G T C A C G T A C T G T C G A G C T A T G C A C T G A

SRSF2(RRM)/Homo_sapiens-RNCMPT00072-PBM/HughesRNA

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCTGGAGA--
--AGGAGANG
 A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A A C G T A C G T
A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C T A G C T A G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCTGGAGA------
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

nub/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGAGA-
GCTTGCATAA
 A C G T A G T C A G T C A C G T A C T G A C T G C G T A C T A G C G T A A C G T
T A C G A G T C G A C T A C G T C T A G A G T C C G T A C G A T C G T A C G T A