Information for 3-GCGTGAKT (Motif 26)

T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
Reverse Opposite:
T G C A T G C A C A G T T G A C G C T A A G T C C A T G A T G C
p-value:1e-37
log p-value:-8.553e+01
Information Content per bp:1.574
Number of Target Sequences with motif1110.0
Percentage of Target Sequences with motif15.34%
Number of Background Sequences with motif2120.4
Percentage of Background Sequences with motif10.45%
Average Position of motif in Targets102.1 +/- 56.3bp
Average Position of motif in Background101.0 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAKT
TGCGTG---
 A C G T T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

CG33714(RRM)/Drosophila_melanogaster-RNCMPT00009-PBM/HughesRNA

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCGTGAKT
NGGCGTG---
 A C G T A C G T T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
A T C G A T C G A C T G A G T C A C T G A G C T A C T G A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGAKT
TTGCGTGCVA
 A C G T A C G T T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

hkb/dmmpmm(Noyes)/fly

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GCGTGAKT
GGGGGCGTGANG
 A C G T A C G T A C G T A C G T T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
C T A G C A T G C T A G C T A G A C T G A G T C A C T G C A G T A T C G C G T A C A T G A C T G

hkb/MA0450.1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCGTGAKT
GGGGCGTGA--
 A C G T A C G T A C G T T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
C A T G C T A G A C T G A C T G A G T C A C T G A C G T A C T G G C T A A C G T A C G T

RBM24(RRM)/Homo_sapiens-RNCMPT00184-PBM/HughesRNA

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAKT
AGTGTGA--
 A C G T T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
C G T A A C T G C G A T A C T G A C G T A C T G C G T A A C G T A C G T

At_0284(RRM)/Arabidopsis_thaliana-RNCMPT00284-PBM/HughesRNA

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAKT
AGTGTGA--
 A C G T T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
C T G A A C T G C G A T A C T G A C G T A C T G C T G A A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGTGAKT--
CNGTGATTTN
 T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T A C G T A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

SUP-12(RRM)/Caenorhabditis_elegans-RNCMPT00179-PBM/HughesRNA

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAKT
TGTGTGA--
 A C G T T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
C G A T A C T G C G A T A C T G A C G T A C T G C G T A A C G T A C G T

ASD-1(RRM)/Caenorhabditis_elegans-RNCMPT00180-PBM/HughesRNA

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAKT
TGCATGA--
 A C G T T A C G G T A C T C A G C G A T A C T G G T C A A C G T A C G T
C G A T A C T G A G T C C G T A A C G T A C T G G T C A A C G T A C G T