Information for 3-TCGCGGCGCAAG (Motif 3)

A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C T G C G T A
p-value:1e-12
log p-value:-2.817e+01
Information Content per bp:1.530
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets77.0 +/- 0.2bp
Average Position of motif in Background55782.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PHO2/PHO2_H2O2Hi/[](Harbison)/Yeast

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TCGCGGCGCAAG
-CGCACCGCACG
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T G T A C C T A G G A T C T C G A A T G C G T A C A C T G A G T C C T G A A G T C A T C G

STP1(MacIsaac)/Yeast

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TCGCGGCGCAAG
-TGCGGCGC---
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T A G C T C T A G A G T C A C T G C T A G A G T C C A T G A T G C A C G T A C G T A C G T

STP1/MA0394.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCGCGGCGCAAG
-TGCGGCGC---
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T A G C T C T A G A G T C A C T G C T A G A G T C C A T G A T G C A C G T A C G T A C G T

Mad/dmmpmm(Down)/fly

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCGCGGCGCAAG
-CGCGACGCCAG
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T T G A C A C T G T A G C T A C G T C G A G T A C C A T G T A G C G T A C T C G A T A C G

RAP2-10/MA0980.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCGCGGCGCAAG
-GGCGGCGC---
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T C T A G T A C G G T A C T A C G A T C G G A T C C A T G T A G C A C G T A C G T A C G T

ERF109/MA1053.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCGCGGCGCAAG
-GGCGGCGC---
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T C A T G C T A G T A G C C A T G A T C G A T G C A C T G A T G C A C G T A C G T A C G T

CRF4/MA0976.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCGCGGCGCAAG
-GGCGGCGC---
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T A C T G C T A G A T G C A C T G A T C G A G T C A C T G A T G C A C G T A C G T A C G T

RAP2-6/MA1052.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCGCGGCGCAAG
-GGCGGCGC---
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T C A T G C A T G A G T C A C T G A T C G A G T C C A T G A T G C A C G T A C G T A C G T

RAP2-3/MA1051.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCGCGGCGCAAG
-GGCGGCGC---
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T C A T G C A T G G T A C A C T G A T C G A G T C C A T G A T G C A C G T A C G T A C G T

Mad/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCGCGGCGCAAG
-CGCGGCGCCAG
 A C G T A G T C A C T G A G T C A C T G A C T G A G T C A C T G A G T C C G T A C G T A A C T G
A C G T T G A C C A T G T G A C A T C G T C A G G A T C C T A G G T A C A G T C T C G A C A T G