Information for 6-GAGACTCG (Motif 33)

A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G
Reverse Opposite:
T A G C T C A G G T C A C A T G C G A T A G T C C G A T T A G C
p-value:1e-28
log p-value:-6.640e+01
Information Content per bp:1.594
Number of Target Sequences with motif1253.0
Percentage of Target Sequences with motif17.32%
Number of Background Sequences with motif2579.8
Percentage of Background Sequences with motif12.71%
Average Position of motif in Targets98.5 +/- 54.7bp
Average Position of motif in Background101.2 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARG80(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GAGACTCG
-AGACGC-
 A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G
A C G T C G T A A C T G C G T A A G T C C A T G A G T C A C G T

ARG80/MA0271.1/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GAGACTCG
-AGACGC-
 A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G
A C G T C G T A A C T G C G T A A G T C C A T G A G T C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GAGACTCG------
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

BAS1/BAS1_SM/2-BAS1(Harbison)/Yeast

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGACTCG
-TGACTC-
 A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G
A C G T C G A T A T C G C G T A A G T C A C G T A G T C A C G T

ARG81(MacIsaac)/Yeast

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAGACTCG
GTGACTCN
 A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G
C T A G C G A T C T A G C G T A A G T C C G A T A G T C G A C T

ARG81/MA0272.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAGACTCG
GTGACTCT
 A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G
C T A G C G A T C T A G C G T A A G T C C G A T A G T C G A C T

BAS1(MacIsaac)/Yeast

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGACTCG---
-TGACTCTTNC
 A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G A C G T A C G T A C G T
A C G T C A G T T C A G C T G A A G T C A G C T A G T C A G C T C A G T A G T C G A T C

SWI6(MacIsaac)/Yeast

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGACTCG
--GACGCG
 A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G
A C G T A C G T C T A G T C G A G A T C C T A G A G T C C T A G

AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGACTCG
THWNAGAWTC-
 A C G T A C G T A C G T A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G
G A C T G A C T G C T A G C A T C T G A A C T G C G T A C G A T G C A T A G T C A C G T

MBP1(MacIsaac)/Yeast

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGACTCG-
--GACGCGT
 A T C G G C T A T C A G G C T A G T A C C A G T A G T C A T C G A C G T
A C G T A C G T C T A G G C T A G A T C T C A G A G T C T C A G A G C T