Information for 20-ATGACAATCC (Motif 38)

C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T
p-value:1e-24
log p-value:-5.662e+01
Information Content per bp:1.530
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.0 +/- 23.5bp
Average Position of motif in Background116.2 +/- 42.6bp
Strand Bias (log2 ratio + to - strand density)4.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR1(KH)/Homo_sapiens-RNCMPT00161-PBM/HughesRNA

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ATGACAATCC
AATGACAA---
 A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
C G T A C G T A A G C T A C T G C T G A G T A C C T G A C G T A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATGACAATCC
TTGACAG---
 C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

ems/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATGACAATCC
TAATGACA----
 A C G T A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
A C G T C A G T C G T A A C G T A C T G C G T A A T G C C G T A A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATGACAATCC
CATGAC-----
 A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATGACAATCC
RHTGWCAR---
 A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATGACAATCC
ANNTGACAGN--
 A C G T A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
G C T A C T A G C G A T A C G T A C T G C G T A A G T C C G T A A T C G A G T C A C G T A C G T

vis/MA0252.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ATGACAATCC
-TGACAG---
 C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
A C G T A C G T A C T G C G T A A G T C C G T A A T C G A C G T A C G T A C G T

achi/MA0207.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATGACAATCC
-TGACAG---
 C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
A C G T A C G T A C T G C G T A A G T C C G T A C T A G A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATGACAATCC-
--GACAATGNN
 C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATGACAATCC
ARNTGACA----
 A C G T A C G T C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A G T C A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T