Information for 23-CTTCATTGAT (Motif 40)

A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
p-value:1e-23
log p-value:-5.319e+01
Information Content per bp:1.530
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.9 +/- 10.9bp
Average Position of motif in Background86.6 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)4.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CTTCATTGAT---
NNCATTCATTCATNNN
 A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CTTCATTGAT---
NANTTCATTGAATTA
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTTCATTGAT--
TTTGATTGATGN
 A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:CTTCATTGAT----
----ATTGATTYND
 A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CTTCATTGAT----
GACNTCATTAATAANN
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CTTCATTGAT----
NNANTGATTGATNTTN
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTTCATTGAT--
--TAATTGATTA
 A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PH0006.1_Barhl2/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTTCATTGAT----
NNNTTAATTGGTTTTT
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

Unc4/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTTCATTGAT
NCTTAATTGA-
 A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T
A G C T A G T C A G C T A C G T C G T A C G T A A C G T C G A T T C A G C T G A A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTTCATTGAT----
NNANTGATTGATNNNN
 A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C