Information for 9-CGTACTAA (Motif 41)

A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A
Reverse Opposite:
A C G T A C G T C T G A C T A G A C G T C G T A A G T C A C T G
p-value:1e-21
log p-value:-5.005e+01
Information Content per bp:1.961
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif71.3
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets109.5 +/- 48.4bp
Average Position of motif in Background112.8 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----CGTACTAA
NNDCCGTACDNN
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A
C G A T C A T G C G A T G A T C G T A C A C T G A C G T C G T A A G T C C T G A C G T A G C A T

SPL5/MA1059.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CGTACTAA
NCCGTACNN-
 A C G T A C G T A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A
C T A G G T A C G A T C C T A G A C G T C T G A G A T C G C T A G T C A A C G T

SF1(KH)/Drosophila_melanogaster-RNCMPT00065-PBM/HughesRNA

Match Rank:3
Score:0.76
Offset:3
Orientation:forward strand
Alignment:CGTACTAA--
---ACTAACN
 A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G T A A G T C T C G A

YAP7(MacIsaac)/Yeast

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CGTACTAA-
GCTTACTAAT
 A C G T A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A A C G T
C A T G T G A C C G A T A C G T T C G A A T G C G A C T T G C A T C G A C A G T

SPL12/MA1057.1/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CGTACTAA
NCCGTACN--
 A C G T A C G T A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A
C G T A G A T C T G A C C A T G A C G T T C G A A G T C G C T A A C G T A C G T

ARR1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGTACTAA
-TTACTAA
 A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A
A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A

YAP3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGTACTAA
-TTACTAA
 A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A
A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A

YAP5/Literature(Harbison)/Yeast

Match Rank:8
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGTACTAA
-TTACTAA
 A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A
A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A

YAP6/Literature(Harbison)/Yeast

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGTACTAA
-TTACTAA
 A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A
A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A

YAP3(MacIsaac)/Yeast

Match Rank:10
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGTACTAA
-TTACTAA
 A G T C A C T G A C G T G T C A A G T C A G C T C G T A C G T A
A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A