Information for 12-CAATCGGA (Motif 44)

A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A
Reverse Opposite:
A C G T A G T C G A T C C A T G T C G A A G C T C A G T A T C G
p-value:1e-20
log p-value:-4.704e+01
Information Content per bp:1.792
Number of Target Sequences with motif494.0
Percentage of Target Sequences with motif6.83%
Number of Background Sequences with motif891.2
Percentage of Background Sequences with motif4.39%
Average Position of motif in Targets89.0 +/- 53.4bp
Average Position of motif in Background105.4 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CAATCGGA
AGCCAATCGG-
 A C G T A C G T A C G T A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

HAP3/MA0314.1/Jaspar

Match Rank:2
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------CAATCGGA
TCTNAACCAATCAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A
C G A T G A T C G A C T A T C G T C G A C T G A A G T C A G T C C G T A C G T A A C G T T A G C C T G A C A T G T G C A

HAP5/MA0316.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CAATCGGA-----
ACCAATCAGANCCCA
 A C G T A C G T A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A A C G T A C G T A C G T A C G T A C G T
C T G A A T G C A G T C G T C A C G T A A C G T T A G C C T G A T A C G T G C A C A G T A T G C T A G C A T G C T G C A

HAP4(MacIsaac)/Yeast

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAATCGGA-----
ACCAATCAGNNNCGA
 A C G T A C G T A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A A C G T A C G T A C G T A C G T A C G T
T C G A A T G C G T A C C G T A G T C A A G C T A T G C C T G A T C A G T C G A A T C G A T C G A T G C A T C G T G C A

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.70
Offset:-8
Orientation:forward strand
Alignment:--------CAATCGGA
AAATGGACCAATCAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CAATCGGA-----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

CBF(- other)/several species/AthaMap

Match Rank:7
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CAATCGGA
AATTCCAATTATA
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A
C G T A C G T A C A G T C G A T G T A C A G T C C G T A C G T A A C G T C G A T G C T A G C A T G C T A

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAATCGGA
CCAATCAA-
 A C G T A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

STB4/MA0391.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAATCGGA-
--CTCGGAA
 A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A A C G T
A C G T A C G T A G T C A C G T A G T C A C T G A C T G C G T A C G T A

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CAATCGGA---
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A T C G A A G C T G T A C C T A G T C A G C G T A A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A