Information for 13-CGRAGCBA (Motif 45)

T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
Reverse Opposite:
A G C T T A G C T C A G A G T C C A G T A G C T A G T C A C T G
p-value:1e-20
log p-value:-4.676e+01
Information Content per bp:1.670
Number of Target Sequences with motif405.0
Percentage of Target Sequences with motif5.60%
Number of Background Sequences with motif694.7
Percentage of Background Sequences with motif3.42%
Average Position of motif in Targets96.6 +/- 56.4bp
Average Position of motif in Background96.9 +/- 66.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CGRAGCBA
CGGAGC--
 T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CGRAGCBA
NGAAGC--
 T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

che-1/MA0260.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGRAGCBA
-GAAACC-
 T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
A C G T A C T G C G T A C G T A C T G A A G T C A T G C A C G T

MA0260.1_che-1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGRAGCBA
-GAAACC-
 T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
A C G T A C T G C G T A C G T A C T G A A G T C A T G C A C G T

GCR2(MacIsaac)/Yeast

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGRAGCBA
NGGAAGC--
 A C G T T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
C G T A T A C G C T A G C G T A G C T A A C T G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGRAGCBA
--CAGCC-
 T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGRAGCBA
TCGGNNCGA
 A C G T T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
A C G T A G T C A C T G A C T G A C G T A C G T A G T C A C T G C G T A

STB4(MacIsaac)/Yeast

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGRAGCBA
TCGGNNCGA
 A C G T T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
A C G T A G T C A C T G A C T G A C G T A C G T A G T C A C T G C G T A

ZC3H10(Znf)/Homo_sapiens-RNCMPT00085-PBM/HughesRNA

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGRAGCBA
-GCAGCGC
 T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
A C G T A T C G T A G C G T C A A C T G A G T C A C T G G T A C

GCR2/MA0305.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGRAGCBA
NGGAAGC--
 A C G T T G A C C T A G T C G A G T C A T C A G A G T C A T C G T C G A
C G T A A T C G C T A G C G T A G C T A A C T G A G T C A C G T A C G T