Information for 6-GCCGTCCCAAAA (Motif 6)

A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A G T C A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.085e+01
Information Content per bp:1.530
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets118.0 +/- 0.2bp
Average Position of motif in Background21796.0 +/- 21375.3bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ORB2(RRM)/Drosophila_melanogaster-RNCMPT00126-PBM/HughesRNA

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GCCGTCCCAAAA
-----CCCAAAC
 A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T G T A C G T A C G T A C C G T A C G T A C G T A G T A C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCGTCCCAAAA-
ATCCCCGCCCCTAAAA
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCGTCCCAAAA--
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Ng_0261(RRM)/Naegleria_gruberi-RNCMPT00261-PBM/HughesRNA

Match Rank:4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GCCGTCCCAAAA--
-------CAAAATT
 A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A G A C T A G C T

RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCGTCCCAAAA
WWRGCCGGCY-----
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A
G C A T G C A T C T A G C T A G T G A C G T A C A C T G A C T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCGTCCCAAAA-----
TCCATCCCATAATACTC
 A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

HNRNPH2(RRM)/Homo_sapiens-RNCMPT00160-PBM/HughesRNA

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCCGTCCCAAAA
-CCCTCCC----
 A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A
A C G T A G T C A T G C T G A C C G A T A G T C A T G C A T G C A C G T A C G T A C G T A C G T

ERF098/MA0999.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCGTCCCAAAA
CCGCCGCC------
 A C G T A C G T A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A
T A G C T G A C T C A G A T G C G T A C T C A G G A T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCGTCCCAAAA-
TCACCCCGCCCCAAATT
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

B52(RRM)/Drosophila_melanogaster-RNCMPT00134-PBM/HughesRNA

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCGTCCCAAAA
NCCCTCC-----
 A C T G A G T C A G T C A C T G A C G T A G T C A G T C A G T C C G T A C G T A C G T A C G T A
A G T C A G T C A G T C T A G C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T