Information for 7-GACAATACGTTG (Motif 7)

A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
Reverse Opposite:
A G T C C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C T G A C G T A G T C
p-value:1e-8
log p-value:-2.059e+01
Information Content per bp:1.982
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets1600.0 +/- 0.0bp
Average Position of motif in Background12684.5 +/- 5162.7bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SKO1/MA0382.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GACAATACGTTG
--CATTACGT--
 A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
A C G T A C G T A G T C C G T A C G A T A C G T C G T A A G T C A C T G A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACAATACGTTG
GACAATGNN---
 A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T

ROX1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACAATACGTTG
AACAATACA---
 A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
C G T A C G T A A G T C C G T A C G T A A C G T C T A G A T C G C T A G A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GACAATACGTTG
NNNNNGAACAATTGANN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GACAATACGTTG
TCACGGAACAATAGGTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GACAATACGTTG
-ACCATATGGT-
 A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GACAATACGTTG
TTAAGAACAATAAATT-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACAATACGTTG---
CATACAATACGAAATAA
 A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GACAATACGTTG
-ACCATATGTT-
 A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T

YAP3/MA0416.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GACAATACGTTG
---ATTACGTA-
 A C T G C G T A A G T C C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T C T A G
A C G T A C G T A C G T T G C A A C G T A C G T C G T A A G T C A C T G A C G T C G T A A C G T