Information for 10-GAAAGGGAACGA (Motif 9)

A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.143e+01
Information Content per bp:1.530
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif23.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets93.8 +/- 12.6bp
Average Position of motif in Background23735.1 +/- 21243.0bp
Strand Bias (log2 ratio + to - strand density)-2.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

UME1/UME1_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAAAGGGAACGA-
--AAGGAAANGTA
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A A C G T
A C G T A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A T G C A A C T G C G A T C G T A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAAAGGGAACGA
GAAAGTGAAAGT
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

NDD1(MacIsaac)/Yeast

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAAAGGGAACGA
AAAGGGGAAA--
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
T C G A C T G A C T G A T C A G C T A G C T A G A T C G T G C A T C G A C T G A A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGAACGA--
AGAAAGTGAAAGTGA
 A C G T A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Blimp-1/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGGAACGA
AANGAAAGTGAAAGT
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
G T C A T G C A G A C T C T A G C G T A T C G A C G T A C T A G A G C T A C T G C G T A C T G A C G T A C T A G A G C T

blmp-1/MA0537.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAAAGGGAACGA
AAAAGTGAAAA-
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
C T G A C T G A C T G A C T G A C T A G C G A T A C T G C G T A C T G A C T G A T C G A A C G T

RO3G_00049(RRM)/Rhizopus_oryzae-RNCMPT00205-PBM/HughesRNA

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAAAGGGAACGA
--AGGGGAA---
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
A C G T A C G T C T G A C A T G A C T G A C T G A C T G C T G A C G T A A C G T A C G T A C G T

Lm_0254(RRM)/Leishmania_major-RNCMPT00254-PBM/HughesRNA

Match Rank:8
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GAAAGGGAACGA
-----NGAACGA
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G C T A A C T G C G T A C G T A A G T C A C T G G T C A

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGGAACGA
GAGAACCGAAACTG
 A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAAGGGAACGA
GAAAGTGAAAGT
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T