Left reads: Input : 41930858 Mapped : 37477877 (89.4% of input) of these: 610996 ( 1.6%) have multiple alignments (23148 have >20) Right reads: Input : 41930858 Mapped : 36927225 (88.1% of input) of these: 595088 ( 1.6%) have multiple alignments (23176 have >20) 88.7% overall read mapping rate. Aligned pairs: 36281658 of these: 576343 ( 1.6%) have multiple alignments 332175 ( 0.9%) are discordant alignments 85.7% concordant pair alignment rate.