Left reads: Input : 57441144 Mapped : 50579111 (88.1% of input) of these: 725821 ( 1.4%) have multiple alignments (37209 have >20) Right reads: Input : 57441144 Mapped : 49832444 (86.8% of input) of these: 707942 ( 1.4%) have multiple alignments (37238 have >20) 87.4% overall read mapping rate. Aligned pairs: 48855245 of these: 684944 ( 1.4%) have multiple alignments 396639 ( 0.8%) are discordant alignments 84.4% concordant pair alignment rate.