Left reads: Input : 41827736 Mapped : 34593762 (82.7% of input) of these: 489780 ( 1.4%) have multiple alignments (18505 have >20) Right reads: Input : 41827736 Mapped : 34100845 (81.5% of input) of these: 476797 ( 1.4%) have multiple alignments (18515 have >20) 82.1% overall read mapping rate. Aligned pairs: 33439722 of these: 461116 ( 1.4%) have multiple alignments 269284 ( 0.8%) are discordant alignments 79.3% concordant pair alignment rate.