Left reads: Input : 30023288 Mapped : 27420732 (91.3% of input) of these: 554594 ( 2.0%) have multiple alignments (14992 have >20) Right reads: Input : 30023288 Mapped : 27148488 (90.4% of input) of these: 545705 ( 2.0%) have multiple alignments (15004 have >20) 90.9% overall read mapping rate. Aligned pairs: 26729638 of these: 533114 ( 2.0%) have multiple alignments 212083 ( 0.8%) are discordant alignments 88.3% concordant pair alignment rate.