Tissue Rep Raw Reads Trimmed Reads Aligned Reads Filtered Reads Deduplicated Total % Lung A 41,533,367 38,845,706 ( 93.5%) 35,161,350 ( 90.5%) 32,309,017 ( 91.9%) 28,888,738 ( 89.4%) 69.6% Lung B 24,450,905 23,241,170 ( 95.1%) 18,473,468 ( 79.5%) 16,842,688 ( 91.2%) 16,038,523 ( 95.2%) 65.6%