Left reads: Input: 55734496 Mapped: 51743696 (92.8% of input) of these: 1316665 ( 2.5%) have multiple alignments (1473 have >20) Right reads: Input: 55734496 Mapped: 51306195 (92.1% of input) of these: 1450961 ( 2.8%) have multiple alignments (1410 have >20) 92.4% overall read alignment rate. Aligned pairs: 50246140 of these: 671548 ( 1.3%) have multiple alignments and: 483261 ( 1.0%) are discordant alignments 89.3% concordant pair alignment rate.