Information for 13-CAGGGTCCATGC (Motif 11)

T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C
Reverse Opposite:
T C A G A T G C G T C A A C G T C T A G T C A G C G T A A G T C A G T C G A T C G C A T A C T G
p-value:1e-4
log p-value:-9.833e+00
Information Content per bp:1.649
Number of Target Sequences with motif891.0
Percentage of Target Sequences with motif18.05%
Number of Background Sequences with motif3503.6
Percentage of Background Sequences with motif15.99%
Average Position of motif in Targets980.8 +/- 1031.9bp
Average Position of motif in Background1494.2 +/- 2395.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRG1/MA0347.1/Jaspar

Match Rank:1
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------CAGGGTCCATGC--
CTAGATCAGGGTCCATCGCA
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C A C G T A C G T
G A T C G C A T T C G A T C A G C T G A G A C T G T A C T C G A C A T G C A T G C T A G G C A T G A T C A G T C G C T A C G A T A G T C C T A G T A G C C G T A

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CAGGGTCCATGC
-AGGGTCC----
 T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C
A C G T T G C A A T C G A C T G C T A G G C A T A G T C A G T C A C G T A C G T A C G T A C G T

NRG1(MacIsaac)/Yeast

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CAGGGTCCATGC
-AGGGTCC----
 T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C
A C G T T C G A C T A G T C A G C A T G G C A T G A T C A G T C A C G T A C G T A C G T A C G T

TCP16/MA0587.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAGGGTCCATGC
CCGGGTCCAC--
 T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C
A T G C A G T C A C T G A C T G A T C G G A C T A G T C A G T C C T G A G A T C A C G T A C G T

TCP5/MA1067.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGGGTCCATGC
--GGGACCAC--
 T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C
A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A G T C A C G T A C G T

Tv_0259(RRM)/Trichomonas_vaginalis-RNCMPT00259-PBM/HughesRNA

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAGGGTCCATGC
-----ACCATGN
 T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A A C G T A C T G C T G A

TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGGTCCATGC
NNNNNNNRGGHCCAC--
 A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C
G A C T A T C G T C G A T C G A C T G A A T G C G C A T C T G A A C T G A C T G G T C A A G T C A G T C C G T A A G T C A C G T A C G T

LEC2/MA0581.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGGGTCCATGC----
-----TGCATGCACAT
 T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G G A T C C G T A A C G T A C T G A G T C T C G A G T A C G C T A G C A T

ttk/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGGGTCCATGC
CAAGGTCCTGGC
 T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C
T A G C T C A G C G T A A C T G C T A G A C G T A G T C A G T C A G C T A C T G T A C G A G T C

EIF-2ALPHA(S1)/Drosophila_melanogaster-RNCMPT00273-PBM/HughesRNA

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CAGGGTCCATGC-
------GCATGCT
 T G A C C G T A C T A G T C A G T C A G G C A T A G T C A G T C T G C A C A G T T A C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G A T