Information for 15-DAGASWGWRAGA (Motif 13)

C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A
Reverse Opposite:
G C A T T G A C G C A T G A T C G C A T A G T C G C A T A T C G A G C T T G A C G A C T G A T C
p-value:1e-4
log p-value:-9.267e+00
Information Content per bp:1.471
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif157.1
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets777.6 +/- 758.2bp
Average Position of motif in Background1307.3 +/- 2519.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: GA-repeat

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:DAGASWGWRAGA
--GAGAGAGAGA
 C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A
A C G T A C G T C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A

GAGA-repeat/SacCer-Promoters/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:DAGASWGWRAGA---
GAGAGAGARAGARAG
 C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A A C G T A C G T A C G T
C T A G T C G A C T A G T G C A T C A G C T G A C T A G C T G A C T A G T C G A C T A G C T G A C T A G C G T A C T A G

eor-1/MA0543.1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---DAGASWGWRAGA
AGAGAGACGCAGAGA
 A C G T A C G T A C G T C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A
C T G A C T A G T C G A C T A G G C T A C T A G C T G A T A G C C T A G T A G C T G C A T C A G C T G A T A C G C T G A

Trl/dmmpmm(Down)/fly

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:DAGASWGWRAGA
GAGAGAGAGAGC
 C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A
T C A G T G C A T C A G G T C A C A T G T C G A T C A G G T C A C T A G T G C A C T A G G T A C

BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:DAGASWGWRAGA---
TAGAGAGAGAGARAR
 C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A A C G T A C G T A C G T
C A G T G C T A A C T G C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T A G C G T A C T G A C T G A C T A G

GAGA-repeat/Arabidopsis-Promoters/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:DAGASWGWRAGA
-RGAGAGAGAG-
 C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A
A C G T C T G A T A C G C G T A A T C G C G T A A T C G G C T A A T C G C G T A T A C G A C G T

Trl/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:DAGASWGWRAGA--
GAGAGAGAGAGCAA
 C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A A C G T A C G T
T C A G T G C A T C A G G C T A A C T G T G C A T C A G C T G A C T A G G T C A C T A G G T A C T C G A C T G A

FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-DAGASWGWRAGA
RGAGAGAGAAAG-
 A C G T C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A
C T A G C T A G T C G A C T A G C G T A A T C G T C G A A C T G C T G A T C G A C T G A T A C G A C G T

Trl/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-DAGASWGWRAGA
AGAGAGAGAGNAA
 A C G T C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A
G C T A T C A G C T G A C A T G T C G A T C A G G T C A A T C G G T C A T C A G T G C A G C T A C T G A

BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:DAGASWGWRAGA---
---GARGAGAGAGAA
 C T A G C T G A A C T G T C G A T A G C C G T A T C A G C G T A C T A G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G C T A C T A G T A C G C G T A T C A G C G T A A C T G C G T A C A T G C T G A C G T A