Information for 3-TGGACTGACC (Motif 18)

C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C
Reverse Opposite:
C T A G T A C G G C A T A T G C C G T A T A C G A G C T T A G C T G A C G C T A
p-value:1e-2
log p-value:-4.911e+00
Information Content per bp:1.647
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets924.9 +/- 497.5bp
Average Position of motif in Background1164.2 +/- 1174.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTGACC-
GTGGCGTGACNG
 A C G T C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:TGGACTGACC-
-----TGACCT
 C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Initiator/Drosophila-Promoters/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGGACTGACC
-CRACTGAN-
 C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C
A C G T T G A C C T A G C T G A G A T C A G C T A T C G T G C A C G T A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TGGACTGACC---
-----TGACCYCT
 C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Hr46/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGGACTGACC-
-----TGACCC
 C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGGACTGACC
ATGGGGTGAT-
 A C G T C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TGGACTGACC---
-----TGACCTYA
 C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTGACC
ATGGGGTGAT-
 A C G T C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TGGACTGACC-----
-----TGACCTTGAT
 C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

RTG3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGGACTGACC
----GTGACC
 C G A T A C T G A T C G T C G A A T G C G C A T T A C G C G T A A T G C A G T C
A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A A G T C A G T C