Information for 7-CGTCTCGCTG (Motif 19)

T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G
Reverse Opposite:
G T A C C T G A A T C G A G T C T A C G C T G A A T C G C G T A A T G C A T C G
p-value:1e-1
log p-value:-3.398e+00
Information Content per bp:1.571
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif391.1
Percentage of Background Sequences with motif1.78%
Average Position of motif in Targets1032.7 +/- 1213.9bp
Average Position of motif in Background1693.0 +/- 3108.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGTCTCGCTG---
---CCTGCTGAGH
 T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.64
Offset:6
Orientation:forward strand
Alignment:CGTCTCGCTG--
------GCTGTG
 T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTCTCGCTG-
WADTGTCGGTGR
 A C G T T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T
G C A T G C T A C T A G A G C T A C T G C G A T A G T C A C T G A C T G A G C T A C T G T C A G

HAC1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTCTCGCTG---
-GACACGCTGGCA
 T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T A C G T A C G T
A C G T A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A G T C G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGTCTCGCTG-----
NNTCCTGCTGTGNNN
 T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTCTCGCTG-
-DTGTCGGTGG
 T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T
A C G T C T A G G C A T C T A G C A G T G A T C T C A G T C A G G A C T C T A G T C A G

ZC3H10(Znf)/Homo_sapiens-RNCMPT00085-PBM/HughesRNA

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGTCTCGCTG-
----GCGCTGC
 T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C G T A T C G A T G C

bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGTCTCGCTG---
---HNAGCTGKCM
 T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G T C C T G A C A T G A G T C A C G T C A T G A C G T G T A C G T C A

AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGTCTCGCTG--
--TGTCGGTGGN
 T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C T G A C T G A C G T A C T G T A C G C T A G

RBP1-LIKE(RRM)/Drosophila_melanogaster-RNCMPT00127-PBM/HughesRNA

Match Rank:10
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CGTCTCGCTG--
-----CGTTGAT
 T A G C T A C G G C A T T A G C G A C T A T G C T C A G T A G C G A C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C T G G C A T A C G T A C T G C G T A A C G T