Information for 24-TGGATCAGGGGC (Motif 20)

C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
Reverse Opposite:
T C A G G T A C G A T C G T A C A G T C G C A T C A T G C G T A C G A T T A G C G T A C G T C A
p-value:1e-1
log p-value:-2.735e+00
Information Content per bp:1.595
Number of Target Sequences with motif576.0
Percentage of Target Sequences with motif11.67%
Number of Background Sequences with motif2406.5
Percentage of Background Sequences with motif10.98%
Average Position of motif in Targets953.0 +/- 1035.5bp
Average Position of motif in Background1450.0 +/- 2225.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REI1/MA0364.1/Jaspar

Match Rank:1
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:TGGATCAGGGGC
----TCAGGGG-
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
A C G T A C G T A C G T A C G T G A C T G T A C C G T A A C T G A C T G A C T G C T A G A C G T

MSN2(MacIsaac)/Yeast

Match Rank:2
Score:0.72
Offset:5
Orientation:forward strand
Alignment:TGGATCAGGGGC
-----AAGGGGC
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
A C G T A C G T A C G T A C G T A C G T T G C A T C G A C T A G C T A G C T A G C T A G A T G C

MSN4/Literature(Harbison)/Yeast

Match Rank:3
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TGGATCAGGGGC
-----AAGGGGN
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C T G A C T G A C T G A C G T

MSN4/MA0342.1/Jaspar

Match Rank:4
Score:0.67
Offset:6
Orientation:forward strand
Alignment:TGGATCAGGGGC
------AGGGG-
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A C T G A C T G A C G T

RGM1/MA0366.1/Jaspar

Match Rank:5
Score:0.66
Offset:6
Orientation:forward strand
Alignment:TGGATCAGGGGC
------AGGGG-
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G T A C G A C G T

AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGATCAGGGGC
TGGATAAG----
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
G C A T T C A G A C T G C G T A A C G T G T C A C G T A C T A G A C G T A C G T A C G T A C G T

At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGATCAGGGGC
TGGATAAG----
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
G A C T C T A G A C T G C G T A A C G T G T C A C G T A C A T G A C G T A C G T A C G T A C G T

GIS1/MA0306.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGGATCAGGGGC
---NTTAGGGGT
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
A C G T A C G T A C G T C G A T G C A T G C A T C G T A C T A G A C T G A C T G C T A G C G A T

RPH1/MA0372.1/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGGATCAGGGGC
----TTAGGGGT
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
A C G T A C G T A C G T A C G T C G A T G C A T C G T A A C T G A C T G A C T G A C T G C G A T

MSN2/MA0341.1/Jaspar

Match Rank:10
Score:0.64
Offset:6
Orientation:forward strand
Alignment:TGGATCAGGGGC
------AGGGG-
 C A G T C A T G A T C G G C T A G C A T G T A C C G T A T C A G C A T G C T A G C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G A C T G A C T G A C G T