Information for 13-CCGGTGGCAC (Motif 21)

A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C
Reverse Opposite:
A C T G C G A T T A C G A T G C A G T C C G T A A T G C G A T C C A T G T C A G
p-value:1e0
log p-value:-2.105e+00
Information Content per bp:1.647
Number of Target Sequences with motif689.0
Percentage of Target Sequences with motif13.96%
Number of Background Sequences with motif2932.3
Percentage of Background Sequences with motif13.38%
Average Position of motif in Targets996.3 +/- 1015.0bp
Average Position of motif in Background1474.3 +/- 2293.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCGGTGGCAC
-GGTTGGCAT
 A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

RPN4(MacIsaac)/Yeast

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCGGTGGCAC--
-CGGTGGCAAAA
 A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C A C G T A C G T
A C G T T A G C C T A G A T C G A G C T C T A G A T C G G T A C C T G A C G T A T G C A G C T A

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCGGTGGCAC-
--GGTGGCAAA
 A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C A C G T
A C G T A C G T C T A G T A C G G A C T C T A G C T A G G T A C C T G A C G T A T G C A

RPN4/MA0373.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCGGTGGCAC
--GGTGGCG-
 A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C
A C G T A C G T C T A G A C T G A C G T A C T G A C T G A G T C C T A G A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCGGTGGCAC-
ATTGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

E(spl)/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCGGTGGCAC-
CACAAGGCACA
 A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C A C G T
A G T C C G T A A G T C A C G T A C G T A C T G T A C G A G T C C G T A A G T C C T A G

PHD1(MacIsaac)/Yeast

Match Rank:7
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCGGTGGCAC
----AGGCAC
 A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C
A C G T A C G T A C G T A C G T T C G A C T A G C T A G T G A C C T G A T G A C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCGGTGGCAC-
--NTTGGCANN
 A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCGGTGGCAC---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

MET32/MA0334.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCGGTGGCAC
--TGTGGCG-
 A G T C G T A C C T A G T A C G G C A T T C A G T A C G A T G C G C T A T G A C
A C G T A C G T A C G T C T A G C A G T A C T G A C T G G A T C A C T G A C G T