Information for 17-CTTCTCTCCTTC (Motif 28)

A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
Reverse Opposite:
T C A G T C G A C T G A C T A G T C A G C T G A T C A G T C G A T C A G T C G A C T G A T A C G
p-value:1e-30
log p-value:-7.023e+01
Information Content per bp:1.705
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets105.8 +/- 57.6bp
Average Position of motif in Background117.6 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBM5(RRM)/Homo_sapiens-RNCMPT00154-PBM/HughesRNA

Match Rank:1
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:CTTCTCTCCTTC
-----CTCCTTC
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T G C A T G C A G C T A C G T A T G C

RNP4F(RRM)/Drosophila_melanogaster-RNCMPT00060-PBM/HughesRNA

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTTCTCTCCTTC
CTTCTCT-----
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
G A T C A G C T A G C T T G A C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

SRSF2(RRM)/Homo_sapiens-RNCMPT00072-PBM/HughesRNA

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CTTCTCTCCTTC
--CNTCTCCT--
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
A C G T A C G T A G T C G A T C G C A T A G T C C G A T A G T C A G T C A C G T A C G T A C G T

SeqBias: GA-repeat

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTTCTCTCCTTC
--TCTCTCTCTC
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
A C G T A C G T A G C T A G T C A G C T A G T C A G C T A G T C A G C T A G T C A G C T A G T C

SRSF10(RRM)/Homo_sapiens-RNCMPT00089-PBM/HughesRNA

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTCTCTCCTTC
TTTCTCT-----
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
A G C T A G C T A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

RBM5(Znf)/Homo_sapiens-RNCMPT00055-PBM/HughesRNA

Match Rank:6
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CTTCTCTCCTTC
-----TTCCTTC
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C A G T C A G C T A C G T A G T C

Tb_0230(RRM)/Trypanosoma_brucei-RNCMPT00230-PBM/HughesRNA

Match Rank:7
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CTTCTCTCCTTC-
-----GTCCTTCT
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A C T A G T C A G T C A C G T A C G T A G T C A G C T

SRSF10(RRM)/Homo_sapiens-RNCMPT00088-PBM/HughesRNA

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTCTCTCCTTC
CCTCTCT-----
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
A G T C A G T C A G C T A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

blmp-1/MA0537.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTCTCTCCTTC
-TTTTCNCTTTT
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
A C G T A G C T G A C T G A C T A C G T A G T C G C T A G A T C A G C T A G C T G A C T A G C T

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTCTCTCCTTC
-CTCTCTCY---
 A T G C G A C T A G C T A G T C A G C T A G T C G A C T A G T C G A T C G A C T A C G T A G T C
A C G T A G T C A G C T A G T C A C G T A G T C A G C T A G T C G A T C A C G T A C G T A C G T