Information for 18-TTATCTAGGGAC (Motif 29)

C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C
Reverse Opposite:
A T C G A C G T T G A C G A T C A G T C A G C T G C T A C T A G C T G A C G A T T C G A G T C A
p-value:1e-29
log p-value:-6.821e+01
Information Content per bp:1.745
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets113.0 +/- 50.1bp
Average Position of motif in Background98.5 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNRNPA2B1(RRM)/Homo_sapiens-RNCMPT00024-PBM/HughesRNA

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTATCTAGGGAC
----NTAGGGA-
 C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C
A C G T A C G T A C G T A C G T C A G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTATCTAGGGAC-
-TCCCNNGGGACN
 C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C A C G T
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

HNRNPA1(RRM)/Homo_sapiens-RNCMPT00022-PBM/HughesRNA

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTATCTAGGGAC
----NTAGGGA-
 C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C
A C G T A C G T A C G T A C G T C A G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T

WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTATCTAGGGAC
TDTTCTCMAGGT--
 A C G T A C G T C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C
G A C T C A G T G C A T C G A T T G A C A C G T A T G C G T A C C T G A A C T G A C T G A G C T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTATCTAGGGAC-
ATTCCCAAGGGAAT
 A C G T C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTATCTAGGGAC
YSTTATCT------
 A C G T A C G T C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTATCTAGGGAC
TCTTATCT------
 A C G T A C G T C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNRNPA1L2(RRM)/Homo_sapiens-RNCMPT00023-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTATCTAGGGAC
----TTAGGGA-
 C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C
A C G T A C G T A C G T A C G T C A G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTATCTAGGGAC
NGCTTTCTAGGAAN
 A C G T A C G T C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

DAL80/Literature(Harbison)/Yeast

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTATCTAGGGAC
TTATC-------
 C A G T A G C T G C T A G A C T A G T C C G A T C T G A T C A G C T A G A C T G G T C A T A G C
A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T