Information for 7-ATCVATGC (Motif 33)

C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C
Reverse Opposite:
A C T G A G T C G C T A C G A T A T G C A C T G C G T A C G A T
p-value:1e-27
log p-value:-6.246e+01
Information Content per bp:1.837
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets106.9 +/- 54.3bp
Average Position of motif in Background109.4 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----ATCVATGC
HNRAATCAAT--
 A C G T A C G T A C G T A C G T C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ATCVATGC
TAATCGATAA
 A C G T A C G T C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ATCVATGC
DGATCRATAN
 A C G T A C G T C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

CUX2/MA0755.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATCVATGC
TAATCGATAA
 A C G T A C G T C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

pnr/MA0536.1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATCVATGC
ANCTATCGATA-
 A C G T A C G T A C G T A C G T C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C
T C G A T C G A G T A C G C A T C G T A A C G T A G T C A C T G T C G A C G A T C T G A A C G T

LEC2/MA0581.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ATCVATGC----
-TGCATGCACAT
 C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C A C G T A C G T A C G T A C G T
A C G T C A G T T A C G G A T C C G T A A C G T A C T G A G T C T C G A G T A C G C T A G C A T

BEAF-32/MA0529.1/Jaspar

Match Rank:7
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------ATCVATGC
TCGAAACTATCGATA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C
A C G T T G A C T C A G T G C A C G T A C T G A T G A C G C A T C T G A A C G T A G T C C T A G C T G A G C A T C G T A A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATCVATGC
AAATCACTGC
 A C G T A C G T C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATCVATGC---
-TCCATGCAAA
 C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C A C G T A C G T A C G T
A C G T C A G T G A T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A C G T A

DREF/Drosophila-Promoters/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATCVATGC--
HTATCGATARBT
 A C G T A C G T C G T A C G A T A G T C T A C G C G T A C G A T T A C G T A G C A C G T A C G T
G A T C G C A T C T G A C A G T A G T C C A T G T G C A G C A T C G T A C T A G A G C T G C A T